C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: smoothened, frizzled class receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462420 SMO-003 ENSG00000128602 9606 + 7:129206150-129211128 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungPlacentaENST00000462420
Transcript ID Brain Lung Placenta
ENST00000462420 1.025±0.00 0.832±0.00 3.963±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024K CIL_00024K_0002 CGP 7:129144892-129213545
CIL_0001YH CIL_0001YH_0001 CGP 7:129188872-129430211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001812 Smo-001 protein_coding Mus_musculus 0 608

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