C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00024K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004497-ENSDARG00000002952 CGP 7955 4:14022752-14045329
GeneTranscriptPositionBiotype
ENSDARG00000002952 (smo)
smoothened homolog (Drosophila)
ENSDART00000005985 (smo-001) 14036631-14045329 protein_coding
ENSDARG00000004497 (tspan33)
tetraspanin 33
ENSDART00000002770 (tspan33-001) 14022752-14033465 protein_coding
ENSDART00000111882 (tspan33-201) 14022859-14034030 protein_coding
ENSDART00000148292 (tspan33-002) 14022860-14033025 protein_coding
CIL_00024K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158457-ENSG00000128602 CGP 9606 7:129144892-129213545
GeneTranscriptPositionBiotype
ENSG00000128602 (SMO)
smoothened, frizzled class receptor
ENST00000249373 (SMO-001) 129188872-129213545 protein_coding
ENST00000462420 (SMO-003) 129206150-129211128 nonsense_mediated_decay
ENST00000475779 (SMO-004) 129210508-129212152 nonsense_mediated_decay
ENST00000495998 (SMO-002) 129206285-129209281 retained_intron
ENSG00000158457 (TSPAN33)
tetraspanin 33
ENST00000486685 (TSPAN33-001) 129144892-129168796 protein_coding
ENST00000496963 (TSPAN33-003) 129162450-129164810 retained_intron
ENST00000498745 (TSPAN33-004) 129168212-129169697 processed_transcript
ENST00000614309 (TSPAN33-002) 129166440-129168830 retained_intron
ENSG00000200629 (RNY1P11)
RNA, Ro-associated Y1 pseudogene 11
ENST00000363759 (RNY1P11-201) 129164849-129164961 misc_RNA
ENSG00000243230 (RP11-286H14.8)
ENST00000466717 (RP11-286H14.8-001) 129209775-129213545 antisense
CIL_00024K_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001763-ENSMUSG00000001761 CGP 10090 6:29694222-29761365
GeneTranscriptPositionBiotype
ENSMUSG00000001761 (Smo)
smoothened homolog (Drosophila)
ENSMUST00000001812 (Smo-001) 29735694-29761365 protein_coding
ENSMUSG00000001763 (Tspan33)
tetraspanin 33
ENSMUST00000046750 (Tspan33-001) 29694222-29718559 protein_coding
ENSMUST00000115250 (Tspan33-002) 29694234-29718557 protein_coding
ENSMUST00000137925 (Tspan33-003) 29708028-29714822 retained_intron
ENSMUSG00000081564 (Gm13717)
predicted gene 13717
ENSMUST00000119868 (Gm13717-001) 29750761-29751125 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024K_0001ENSDARG00000002952ENSDART00000005985ENSDARG00000004497ENSDART00000002770ENSDART00000111882ENSDART00000148292CIL_00024K_0002ENSG00000128602ENST00000249373ENST00000462420ENST00000475779ENST00000495998ENSG00000158457ENST00000486685ENST00000496963ENST00000498745ENST00000614309ENSG00000200629ENST00000363759ENSG00000243230ENST00000466717CIL_00024K_0003ENSMUSG00000001761ENSMUST00000001812ENSMUSG00000001763ENSMUST00000046750ENSMUST00000115250ENSMUST00000137925ENSMUSG00000081564ENSMUST00000119868
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024K_0001ENSDARG00000002952ENSDART00000005985ENSDARG00000004497ENSDART00000002770ENSDART00000111882ENSDART00000148292CIL_00024K_0002ENSG00000128602ENST00000249373ENST00000462420ENSG00000158457ENST00000486685ENST00000496963ENST00000498745ENST00000614309ENSG00000200629ENST00000363759ENSG00000243230ENST00000466717CIL_00024K_0003ENSMUSG00000001761ENSMUST00000001812ENSMUSG00000001763ENSMUST00000046750ENSMUST00000115250ENSMUST00000137925ENSMUSG00000081564ENSMUST00000119868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002952 ENSDART00000005985 N/A N/A N/A 1.395±0.23 N/A N/A 2.612±0.74 0.690±0.14 0.163±0.00 N/A 0.571±0.00 N/A N/A N/A
ENSDARG00000004497 ENSDART00000002770 N/A N/A N/A 1.776±0.88 N/A N/A 1.166±0.20 7.578±0.00 6.186±0.00 N/A 0.595±0.00 N/A N/A N/A
ENSDART00000111882 N/A N/A N/A 0.940±0.32 N/A N/A 1.756±0.53 3.107±0.98 3.070±0.00 N/A 0.639±0.00 N/A N/A N/A
ENSDART00000148292 N/A N/A N/A N/A N/A N/A N/A N/A 4.113±0.00 N/A 0.382±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128602 ENST00000249373 1.681±0.00 2.767±0.00 1.593±0.00 2.906±0.00 2.831±1.67 3.874±0.00 0.520±0.35 6.265±1.82 3.798±2.45 0.893±0.59 0.278±0.25 12.099±11.73 2.513±0.80 7.584±4.05
ENST00000462420 N/A N/A N/A 1.025±0.00 N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A 3.963±0.00 N/A
ENST00000475779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000158457 ENST00000486685 2.207±0.00 17.479±0.00 8.981±0.00 5.159±4.78 8.314±0.00 2.406±1.11 1.761±0.78 35.022±33.24 7.119±5.30 2.273±1.95 1.581±0.00 2.576±0.78 7.971±3.57 19.078±14.26
ENST00000496963 N/A N/A N/A N/A N/A 0.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.368±0.00 N/A N/A N/A
ENST00000614309 N/A 3.606±0.00 1.697±0.00 0.738±0.46 0.451±0.00 N/A 0.601±0.00 9.542±0.00 2.140±0.00 1.043±0.21 0.485±0.07 0.527±0.02 1.133±0.00 N/A
ENSG00000200629 ENST00000363759 N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A N/A 10.637±0.00 N/A N/A N/A 0.611±0.00
ENSG00000243230 ENST00000466717 N/A N/A N/A 1.526±0.00 N/A 2.868±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001761 ENSMUST00000001812 22.591±7.83 30.620±3.51 17.160±1.67 8.818±6.58 17.637±2.96 15.367±0.83 3.060±0.89 23.818±2.03 4.261±1.07 16.978±0.79 1.022±0.28 40.635±11.23 4.100±2.57 1.544±0.58
ENSMUSG00000001763 ENSMUST00000046750 0.963±0.37 0.707±0.23 0.560±0.23 2.579±1.02 0.988±0.37 13.559±1.28 0.561±0.29 9.203±3.23 30.092±32.18 1.012±0.05 0.801±0.24 2.196±0.61 7.894±2.21 3.568±0.23
ENSMUST00000115250 0.626±0.07 0.531±0.46 0.473±0.19 2.777±2.69 1.754±0.58 3.996±0.62 0.509±0.36 5.768±1.07 14.663±15.28 0.330±0.10 0.470±0.14 1.835±0.89 4.881±1.64 1.488±0.35
ENSMUST00000137925 N/A N/A N/A 0.274±0.08 0.232±0.02 N/A N/A N/A N/A N/A 0.058±0.01 0.100±0.00 N/A N/A
ENSMUSG00000081564 ENSMUST00000119868 0.619±0.42 0.701±0.00 1.119±0.31 0.522±0.21 0.694±0.19 N/A 0.253±0.14 0.396±0.07 0.216±0.11 0.224±0.03 0.356±0.15 2.673±2.35 0.272±0.05 0.152±0.02

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