C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462872 RP11-441M10.1-001 ENSG00000244249 9606 - 3:159386756-159387440 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENST00000462872
Transcript ID Brain Breast
ENST00000462872 0.863±0.56 0.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JS CIL_0004JS_0002 CGP 3:158962928-159897360

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000187136 RP23-258M15.4-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000118606 Gm3943-001 processed_pseudogene Mus_musculus 1.99965e-42 176
ENSMUST00000119396 Gm12959-001 processed_pseudogene Mus_musculus 4e-25 119

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