C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7638
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121348 Gm7638-001 ENSMUSG00000080790 10090 - 16:11185133-11186099 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121348 0.325±0.25 0.517±0.00 0.380±0.20 0.118±0.08 0.612±0.14 0.468±0.12 0.049±0.02 0.172±0.07 0.163±0.11 0.278±0.00 0.087±0.00 0.606±0.31 0.292±0.25 4.897±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DT CIL_0007DT_0002 CGP 16:11136592-11203331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 422
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 555
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 521
ENST00000413412 RP4-730K3.3-001 transcribed_processed_pseudogene Homo_sapiens 0 267
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 460
ENST00000439199 RPS2P32-001 processed_pseudogene Homo_sapiens 0 420
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 499
ENST00000447334 RPS2P7-001 processed_pseudogene Homo_sapiens 0 494
ENST00000448547 AC007279.2-001 processed_pseudogene Homo_sapiens 0 422
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 527
ENST00000458332 RPS2P46-001 processed_pseudogene Homo_sapiens 0 538
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000462872 RP11-441M10.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000469610 RPS2P52-001 processed_pseudogene Homo_sapiens 0 359
ENST00000469884 RP11-6K23.1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000469997 RPS2P45-002 processed_transcript Homo_sapiens 0 329
ENST00000476944 RPS2P4-001 processed_pseudogene Homo_sapiens 0 521
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 385
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 448
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 505
ENST00000486273 RP11-436M15.1-001 processed_pseudogene Homo_sapiens 0 206
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 536
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000490535 RPS2P45-001 transcribed_processed_pseudogene Homo_sapiens 0 329
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 460
ENST00000494359 RP11-452G18.2-001 processed_pseudogene Homo_sapiens 0 505
ENST00000494599 RPS2P24-001 processed_pseudogene Homo_sapiens 0 446
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 346
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 381
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 344
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 344
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 529
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 555
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 344
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 538
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 538
ENST00000534461 RPS2-014 retained_intron Homo_sapiens 9.99995e-41 171
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 462

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