C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463122 RP11-651P23.4-001 ENSG00000224831 9606 - 3:149982181-149983308 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000463122
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000463122 0.130±0.00 0.247±0.00 0.154±0.00 0.027±0.01 0.036±0.00 0.052±0.03 0.016±0.00 0.027±0.00 0.020±0.01 0.122±0.04 0.142±0.05 0.104±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R5 CIL_0002R5_0001 CGP 3:149812708-150050788
CIL_0002QZ CIL_0002QZ_0001 CGP 3:149964904-150466431

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049470 Tmem183a-001 protein_coding Mus_musculus 0 1480
ENSMUST00000191237 Tmem183a-003 nonsense_mediated_decay Mus_musculus 0 918
ENSMUST00000188205 Tmem183a-002 retained_intron Mus_musculus 0 656
ENSMUST00000121073 Gm15782-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000189572 Tmem183a-005 retained_intron Mus_musculus 0 429
ENSMUST00000185903 Tmem183a-004 protein_coding Mus_musculus 0 322

Loading