C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002R5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082996-ENSG00000070087 CGP 9606 3:149812708-150050788
GeneTranscriptPositionBiotype
ENSG00000070087 (PFN2)
profilin 2 		ENST00000239940 (PFN2-001) 149964904-149971109 protein_coding
ENST00000423691 (PFN2-003) 149964913-149970922 protein_coding
ENST00000452853 (PFN2-002) 149964904-149970950 protein_coding
ENST00000460404 (PFN2-004) 149965689-149970904 nonsense_mediated_decay
ENST00000461868 (PFN2-009) 149968154-149970940 protein_coding
ENST00000461930 (PFN2-011) 149968118-149970904 protein_coding
ENST00000468323 (PFN2-012) 149965713-149970898 nonsense_mediated_decay
ENST00000475518 (PFN2-015) 149966260-149970735 protein_coding
ENST00000481275 (PFN2-016) 149966268-149970401 protein_coding
ENST00000481767 (PFN2-006) 149964935-149970715 protein_coding
ENST00000489155 (PFN2-007) 149966316-149971223 protein_coding
ENST00000490975 (PFN2-010) 149966078-149970925 protein_coding
ENST00000494827 (PFN2-019) 149965857-150022811 protein_coding
ENST00000497060 (PFN2-017) 149966053-149968905 retained_intron
ENST00000497148 (PFN2-018) 149966161-150050788 protein_coding
ENST00000498169 (PFN2-013) 149966251-149970882 nonsense_mediated_decay
ENST00000498307 (PFN2-008) 149966285-149971213 protein_coding
ENSG00000082996 (RNF13)
ring finger protein 13 		ENST00000344229 (RNF13-003) 149812770-149962122 protein_coding
ENST00000361785 (RNF13-002) 149872073-149962126 protein_coding
ENST00000392894 (RNF13-001) 149812708-149962139 protein_coding
ENST00000459632 (RNF13-010) 149813837-149902159 protein_coding
ENST00000466478 (RNF13-006) 149813049-149872049 protein_coding
ENST00000466795 (RNF13-011) 149817242-149902152 protein_coding
ENST00000467977 (RNF13-008) 149813215-149960765 protein_coding
ENST00000467996 (RNF13-016) 149813265-149960750 nonsense_mediated_decay
ENST00000468289 (RNF13-018) 149911993-149961374 protein_coding
ENST00000468648 (RNF13-009) 149813820-149895498 protein_coding
ENST00000470151 (RNF13-005) 149812833-149872074 protein_coding
ENST00000474348 (RNF13-014) 149813228-149960833 nonsense_mediated_decay
ENST00000482083 (RNF13-017) 149895240-149961011 protein_coding
ENST00000490631 (RNF13-015) 149846020-149921184 protein_coding
ENST00000491086 (RNF13-007) 149813204-149961016 protein_coding
ENST00000493238 (RNF13-019) 149959957-149961374 retained_intron
ENSG00000182000 (RP11-651P23.2)
 ENST00000487390 (RP11-651P23.2-001) 149984395-149984797 processed_pseudogene
ENSG00000224831 (RP11-651P23.4)
 ENST00000463122 (RP11-651P23.4-001) 149982181-149983308 processed_pseudogene
ENSG00000239351 (NPM1P29)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 29 		ENST00000483112 (NPM1P29-001) 149938997-149939799 processed_pseudogene
ENSG00000241947 (HNRNPA1P24)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 24 		ENST00000476029 (HNRNPA1P24-001) 149999645-150000690 processed_pseudogene
ENSG00000242791 (RP11-651P23.5)
 ENST00000323689 (RP11-651P23.5-001) 149978098-149979355 lincRNA
ENST00000471176 (RP11-651P23.5-002) 149976755-149979328 lincRNA
ENSG00000243944 (RP11-167H9.4)
 ENST00000472821 (RP11-167H9.4-001) 150096443-150150784 antisense
ENST00000487840 (RP11-167H9.4-003) 150039214-150213614 antisense
ENST00000489690 (RP11-167H9.4-002) 150098032-150213726 antisense
ENSG00000252172 (RNU6-720P)
RNA, U6 small nuclear 720, pseudogene 		ENST00000516363 (RNU6-720P-201) 149917342-149917449 snRNA
CIL_0002R5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036503-ENSMUSG00000027805 CGP 10090 3:57736066-57847564
GeneTranscriptPositionBiotype
ENSMUSG00000027805 (Pfn2)
profilin 2 		ENSMUST00000066882 (Pfn2-001) 57841895-57847564 protein_coding
ENSMUST00000119344 (Pfn2-002) 57841905-57847145 protein_coding
ENSMUST00000120289 (Pfn2-003) 57844670-57847489 protein_coding
ENSMUST00000122210 (Pfn2-004) 57843108-57845878 protein_coding
ENSMUSG00000036503 (Rnf13)
ring finger protein 13 		ENSMUST00000041826 (Rnf13-201) 57736066-57835233 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002R5_0001ENSG00000070087ENST00000239940ENST00000423691ENST00000452853ENST00000468323ENSG00000082996ENST00000344229ENST00000361785ENST00000392894ENST00000467996ENST00000468289ENST00000474348ENST00000490631ENSG00000182000ENST00000487390ENSG00000224831ENST00000463122ENSG00000239351ENST00000483112ENSG00000241947ENST00000476029ENSG00000242791ENST00000323689ENST00000471176ENSG00000243944ENST00000472821ENST00000487840ENSG00000252172ENST00000516363CIL_0002R5_0002ENSMUSG00000027805ENSMUST00000066882ENSMUST00000119344ENSMUST00000120289ENSMUST00000122210ENSMUSG00000036503ENSMUST00000041826
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070087 ENST00000239940 N/A 3.900±0.00 N/A 66.812±40.77 N/A 6.587±2.54 12.312±0.00 17.896±0.00 N/A 5.513±0.00 26.126±20.26 12.282±3.98 11.866±0.00 10.825±0.21
ENST00000423691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.212±0.00 22.173±0.00 16.168±0.00
ENST00000452853 21.192±0.00 5.095±0.00 4.608±0.00 50.143±0.00 19.458±0.00 15.769±0.00 N/A 30.098±0.00 N/A 11.827±0.00 N/A 18.626±7.57 7.727±2.04 24.536±0.00
ENST00000460404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.397±0.00 N/A 15.835±0.00
ENST00000475518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000082996 ENST00000344229 N/A N/A N/A N/A N/A N/A N/A 1.753±0.00 2.773±0.00 N/A N/A N/A N/A N/A
ENST00000361785 N/A N/A N/A 14.282±0.00 N/A N/A N/A 10.202±0.00 6.203±0.00 4.377±0.00 N/A N/A 7.002±0.00 N/A
ENST00000392894 15.012±0.00 10.155±0.00 1.656±0.00 39.668±0.00 16.699±0.00 12.503±0.00 6.348±4.06 14.736±0.00 7.570±0.00 12.594±0.86 10.804±0.00 7.491±2.48 10.604±3.39 10.727±5.77
ENST00000459632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467996 N/A N/A 9.315±0.00 N/A N/A N/A 3.674±0.00 N/A 9.646±0.00 36.302±0.00 N/A N/A N/A N/A
ENST00000468289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.390±0.00 N/A
ENST00000468648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474348 N/A N/A 5.425±0.00 N/A 12.969±0.00 8.707±0.00 2.629±0.00 8.189±0.00 11.646±0.00 N/A N/A N/A N/A N/A
ENST00000482083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490631 N/A N/A N/A N/A N/A N/A 5.086±0.00 N/A N/A N/A N/A 21.011±0.00 N/A N/A
ENST00000491086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182000 ENST00000487390 0.068±0.00 N/A N/A 0.036±0.00 0.034±0.00 N/A 0.156±0.00 0.170±0.00 N/A 0.062±0.00 0.180±0.00 0.108±0.02 N/A 0.262±0.00
ENSG00000224831 ENST00000463122 0.130±0.00 0.247±0.00 N/A 0.154±0.00 0.027±0.01 0.036±0.00 0.052±0.03 0.016±0.00 0.027±0.00 0.020±0.01 N/A 0.122±0.04 0.142±0.05 0.104±0.01
ENSG00000239351 ENST00000483112 0.054±0.00 0.171±0.00 0.296±0.00 0.063±0.03 0.303±0.19 0.150±0.14 0.096±0.00 0.141±0.00 0.139±0.09 0.132±0.00 0.366±0.00 0.226±0.23 N/A 1.177±1.04
ENSG00000241947 ENST00000476029 N/A N/A N/A 0.024±0.00 N/A N/A 0.033±0.00 N/A N/A N/A 0.011±0.00 0.018±0.00 0.018±0.00 N/A
ENSG00000242791 ENST00000323689 N/A 0.095±0.00 N/A N/A 0.239±0.00 0.356±0.00 N/A 0.047±0.00 0.080±0.00 0.211±0.00 0.041±0.00 0.361±0.00 N/A 1.028±0.00
ENST00000471176 N/A N/A N/A 0.113±0.06 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.00
ENSG00000243944 ENST00000472821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.153±0.09
ENST00000487840 N/A N/A N/A 0.097±0.00 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.155±0.02
ENST00000489690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252172 ENST00000516363 N/A 0.914±0.00 N/A N/A N/A N/A N/A N/A N/A 1.157±0.00 N/A N/A N/A 0.801±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027805 ENSMUST00000066882 14.856±9.98 23.866±1.74 40.447±7.72 176.007±50.89 8.344±3.84 3.133±0.64 18.078±1.27 25.112±2.08 1.820±0.97 7.443±1.48 78.004±6.32 22.770±5.67 6.050±3.40 54.690±19.13
ENSMUST00000119344 0.721±0.00 N/A N/A N/A 5.840±6.97 N/A 2.241±0.00 N/A 0.211±0.00 0.915±0.00 16.774±2.07 2.230±0.08 N/A N/A
ENSMUST00000120289 N/A N/A N/A 56.810±0.00 N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A 1.738±0.45 N/A
ENSMUST00000122210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.982±0.00 2.743±0.00 99.027±0.00
ENSMUSG00000036503 ENSMUST00000041826 29.144±3.70 51.256±14.43 30.772±3.26 12.906±3.17 21.382±3.78 14.681±3.53 17.952±3.96 46.574±8.63 30.076±18.30 28.185±1.09 8.164±2.41 26.243±8.49 12.621±4.83 5.358±2.16

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