C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: opsin 1 (cone pigments), long-wave-sensitive
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463296 OPN1LW-003 ENSG00000102076 9606 + X:154144274-154156397 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LD CIL_0001LD_0001 CGP X:154021573-154159032
CIL_0007GD CIL_0007GD_0002 CGP X:154144224-154196135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135307 Opn1mw-003 processed_transcript Mus_musculus 0 730
ENSMUST00000101457 Opn1mw-002 protein_coding Mus_musculus 0 603
ENSMUST00000033771 Opn1mw-001 protein_coding Mus_musculus 0 603
ENSMUST00000123401 Opn1mw-005 processed_transcript Mus_musculus 0 291
ENSMUST00000127445 Opn1mw-006 protein_coding Mus_musculus 0 230
ENSMUST00000145443 Opn1mw-004 processed_transcript Mus_musculus 0 230

Loading