C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | valine--tRNA ligase, mitochondrial isoform 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000464843  |
VARSL-003 |
ENSG00000230985 |
9606 | + |
CHR_HSCHR6_MHC_DBB_CTG1:30909473-30917183  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000165787
|
Vars2-003 | retained_intron | Mus_musculus | 0 | 1040 |
|
ENSMUST00000043674
|
Vars2-001 | protein_coding | Mus_musculus | 0 | 1040 |
|
ENSMUST00000164404
|
Vars2-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1037 |
|
ENSMUST00000168922
|
Vars2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 968 |
|
ENSMUST00000164295
|
Vars2-005 | retained_intron | Mus_musculus | 0 | 473 |
|
ENSMUST00000168885
|
Vars2-010 | retained_intron | Mus_musculus | 0 | 407 |
|
ENSMUST00000169093
|
Vars2-011 | nonsense_mediated_decay | Mus_musculus | 0 | 381 |
|
ENSMUST00000170701
|
Vars2-006 | retained_intron | Mus_musculus | 0 | 285 |
|
ENSMUST00000174129
|
Vars2-012 | retained_intron | Mus_musculus | 0 | 198 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.000000002 | 69 |
