C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465920 PLOD1-007 ENSG00000083444 9606 + 1:11954301-11958593 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0001 VISTA 1:11580820-12184055
CIL_00022Y CIL_00022Y_0002 CGP 1:11919591-11975538
CIL_00022Z CIL_00022Z_0002 CGP 1:11934205-12013514

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124292 Plod1-006 retained_intron Mus_musculus 0 407
ENSMUST00000019199 Plod1-001 protein_coding Mus_musculus 0 407
ENSMUST00000105712 Plod1-007 protein_coding Mus_musculus 7e-19 99

Loading