C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00022Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073801-ENSDARG00000059746 CGP 7955 8:49988392-50054848
GeneTranscriptPositionBiotype
ENSDARG00000059746 (plod1a)
procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a 		ENSDART00000083395 (plod1a-001) 50009104-50054848 protein_coding
ENSDART00000144254 (plod1a-003) 50041007-50043069 processed_transcript
ENSDART00000147159 (plod1a-002) 50009184-50014152 nonsense_mediated_decay
ENSDARG00000073801 (si:dkeyp-104h9.5)
si:dkeyp-104h9.5 		ENSDART00000145429 (si:dkeyp-104h9.5-001) 49988392-50003487 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00022Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116685-ENSG00000083444 CGP 9606 1:11919591-11975538
GeneTranscriptPositionBiotype
ENSG00000083444 (PLOD1)
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 		ENST00000196061 (PLOD1-001) 11934753-11975537 protein_coding
ENST00000358133 (PLOD1-006) 11934734-11954767 processed_transcript
ENST00000429000 (PLOD1-003) 11934743-11957943 protein_coding
ENST00000449038 (PLOD1-005) 11934694-11952691 protein_coding
ENST00000465920 (PLOD1-007) 11954301-11958593 retained_intron
ENST00000470133 (PLOD1-010) 11964702-11966414 retained_intron
ENST00000481933 (PLOD1-002) 11971543-11975536 retained_intron
ENST00000485046 (PLOD1-004) 11934205-11958620 processed_transcript
ENST00000491536 (PLOD1-009) 11964688-11975538 processed_transcript
ENSG00000116685 (KIAA2013)
KIAA2013 		ENST00000376572 (KIAA2013-002) 11919591-11926423 protein_coding
ENST00000376576 (KIAA2013-001) 11922175-11926428 protein_coding
ENST00000616327 (KIAA2013-201) 11920183-11926403 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022Y_0001ENSDARG00000059746ENSDART00000083395ENSDART00000144254ENSDART00000147159ENSDARG00000073801ENSDART00000145429CIL_00022Y_0002ENSG00000083444ENST00000196061ENST00000358133ENST00000429000ENST00000449038ENST00000465920ENST00000470133ENST00000481933ENST00000485046ENST00000491536ENSG00000116685ENST00000376572ENST00000376576ENST00000616327
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022Y_0001ENSDARG00000059746ENSDART00000083395ENSDARG00000073801ENSDART00000145429CIL_00022Y_0002ENSG00000083444ENST00000196061ENST00000485046ENSG00000116685ENST00000376572ENST00000376576ENST00000616327
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059746 ENSDART00000083395 N/A N/A N/A 0.904±0.57 N/A N/A 8.777±1.60 3.265±0.00 0.625±0.00 N/A 5.270±0.00 N/A N/A N/A
ENSDART00000144254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073801 ENSDART00000145429 N/A N/A N/A 0.413±0.23 N/A N/A 0.676±0.06 4.029±1.02 1.886±0.00 N/A 0.264±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083444 ENST00000196061 31.536±0.00 37.984±0.00 3.929±0.00 14.524±0.00 22.041±17.89 29.421±25.90 11.338±9.39 21.533±17.66 26.711±25.35 14.434±12.65 12.947±0.00 46.344±28.81 102.826±22.32 21.722±13.33
ENST00000358133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485046 N/A N/A 3.910±0.00 1.517±0.00 3.424±0.00 N/A 2.449±0.00 N/A 3.433±0.00 2.020±0.00 N/A N/A N/A N/A
ENST00000491536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116685 ENST00000376572 9.146±0.00 14.436±0.00 1.321±0.00 4.803±1.58 6.975±6.29 10.186±5.63 5.852±4.45 10.870±6.53 5.866±4.42 5.361±3.02 9.018±4.57 18.066±16.55 29.423±1.40 27.347±3.35
ENST00000376576 N/A N/A N/A N/A 0.586±0.00 N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A
ENST00000616327 4.439±0.00 3.539±0.00 3.182±0.00 1.782±0.00 4.793±0.02 2.931±0.00 2.146±0.83 4.519±0.00 6.313±1.63 2.040±0.87 4.315±2.25 6.850±4.51 8.945±1.02 N/A

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