C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphodiesterase 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467162 PDE9A-026 ENSG00000160191 9606 + 21:42686197-42762139 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_0001JT CIL_0001JT_0001 CGP 21:42496008-42775509
CIL_0001D2 CIL_0001D2_0002 CGP 21:42653636-42879568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155395 Pde9a-012 retained_intron Mus_musculus 0 551
ENSMUST00000137927 Pde9a-005 nonsense_mediated_decay Mus_musculus 0 551
ENSMUST00000127929 Pde9a-002 protein_coding Mus_musculus 0 551
ENSMUST00000134525 Pde9a-006 protein_coding Mus_musculus 0 551
ENSMUST00000131417 Pde9a-004 nonsense_mediated_decay Mus_musculus 0 551
ENSMUST00000143549 Pde9a-003 nonsense_mediated_decay Mus_musculus 0 551
ENSMUST00000047168 Pde9a-001 protein_coding Mus_musculus 0 551
ENSMUST00000130547 Pde9a-011 retained_intron Mus_musculus 0 435
ENSMUST00000154567 Pde9a-007 retained_intron Mus_musculus 0 422
ENSMUST00000124902 Pde9a-008 nonsense_mediated_decay Mus_musculus 0 420
ENSDART00000114937 CR848033.1-201 protein_coding Danio_rerio 0 231
ENSDART00000111973 CABZ01044346.1-201 protein_coding Danio_rerio 6.02558e-44 182

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