C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468262 TGM2-006 ENSG00000198959 9606 - 20:38137950-38165282 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000468262
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000468262 2.339±0.00 1.293±0.00 8.799±0.00 2.753±0.00 10.716±0.00 7.930±0.00 17.498±0.00 23.704±0.00 22.753±12.77 303.815±0.00 6.916±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NX CIL_0004NX_0001 CGP 20:37983007-38127780
CIL_0004NY CIL_0004NY_0001 CGP 20:38033546-38166578
CIL_0004NZ CIL_0004NZ_0001 CGP 20:38127387-38260772

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103122 Tgm2-001 protein_coding Mus_musculus 0 1526
ENSMUST00000174718 Tgm2-004 nonsense_mediated_decay Mus_musculus 0 276

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