C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: negative regulator of ubiquitin-like proteins 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468404 NUB1-003 ENSG00000013374 9606 + 7:151341804-151361249 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000468404
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000468404 7.213±0.00 6.807±0.00 3.943±0.00 4.484±1.49 1.435±0.00 2.717±1.78 4.324±0.00 1.804±0.63 7.429±4.70 2.019±1.34 4.667±1.11 7.775±1.96 5.264±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RX CIL_0007RX_0001 VISTA 7:151109813-151711422
CIL_0004EL CIL_0004EL_0001 CGP 7:151238764-151378449
CIL_0004EK CIL_0004EK_0001 CGP 7:151341699-151410727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068825 Nub1-201 protein_coding Mus_musculus 0 734

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