C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468532 CHKB-007 ENSG00000100288 9606 - 22:50579450-50582458 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000468532
Transcript ID Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000468532 1.879±1.02 2.532±0.00 0.957±0.00 0.751±0.00 3.031±0.00 21.692±0.00 12.808±0.00 34.338±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HR CIL_0002HR_0001 CGP 22:50568861-50582965

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023289 Chkb-001 protein_coding Mus_musculus 0 542
ENSMUST00000171140 Chkb-004 retained_intron Mus_musculus 0 379
ENSMUST00000170334 Chkb-003 retained_intron Mus_musculus 0 379
ENSMUST00000052315 Chkb-002 retained_intron Mus_musculus 0 379
ENSMUST00000166267 Chkb-007 retained_intron Mus_musculus 0 298
ENSMUST00000165623 Chkb-005 retained_intron Mus_musculus 0 265
ENSMUST00000171666 Chkb-008 nonsense_mediated_decay Mus_musculus 0 243
ENSMUST00000170460 Chkb-009 protein_coding Mus_musculus 7e-30 135

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