C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171140 Chkb-004 ENSMUSG00000022617 10090 - 15:89426367-89429439 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000171140
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000171140 12.299±2.70 12.779±0.52 8.380±1.91 11.600±4.54 14.340±1.19 13.477±3.85 7.560±1.83 11.680±1.86 14.101±6.74 10.884±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028I CIL_00028I_0002 CGP 15:89390174-89425863
CIL_0002HR CIL_0002HR_0002 CGP 15:89416405-89429908

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000406938 CHKB-001 protein_coding Homo_sapiens 0 835
ENST00000452668 CHKB-CPT1B-002 processed_transcript Homo_sapiens 6.99949e-42 174
ENST00000453634 CHKB-CPT1B-001 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000463053 CHKB-010 processed_transcript Homo_sapiens 0 298
ENST00000464225 CHKB-012 processed_transcript Homo_sapiens 0 353
ENST00000465842 CHKB-008 retained_intron Homo_sapiens 0 257
ENST00000468532 CHKB-007 retained_intron Homo_sapiens 0 379
ENST00000471515 CHKB-011 processed_transcript Homo_sapiens 0 285
ENST00000476289 CHKB-006 retained_intron Homo_sapiens 0 298
ENST00000479003 CHKB-004 retained_intron Homo_sapiens 0 544
ENST00000481673 CHKB-003 retained_intron Homo_sapiens 0 835
ENST00000484266 CHKB-005 retained_intron Homo_sapiens 0 695
ENST00000489453 CHKB-009 retained_intron Homo_sapiens 0 235
ENST00000492556 CHKB-CPT1B-003 retained_intron Homo_sapiens 0 544
ENST00000492582 CHKB-002 retained_intron Homo_sapiens 0 835

Loading