C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opsin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469376 OPN3-002 ENSG00000054277 9606 - 1:241593602-241640340 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMusclePlacentaENST00000469376
Transcript ID Breast Colon Heart Lung Muscle Placenta
ENST00000469376 1.521±0.00 0.861±0.00 0.595±0.00 5.232±0.00 0.415±0.00 8.992±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HM CIL_0000HM_0001 CGP 1:241497603-241595642
CIL_0000I7 CIL_0000I7_0001 CGP 1:241532134-241677376
CIL_0003AP CIL_0003AP_0001 CGP 1:241590102-241677376

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027809 Opn3-001 protein_coding Mus_musculus 0 610

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