C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469473 RP11-299L17.1-001 ENSG00000242163 9606 - 14:81332961-81333361 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000469473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000469473 0.030±0.00 0.093±0.00 0.669±0.00 0.495±0.47 0.060±0.00 0.057±0.00 0.055±0.00 0.061±0.00 0.378±0.00 0.377±0.00 0.305±0.27 0.471±0.36 0.259±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0001 VISTA 14:81013259-81617678
CIL_0004TS CIL_0004TS_0001 CGP 14:81175452-81436465
CIL_0000TE CIL_0000TE_0001 CGP 14:81260656-81533861

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184151 RP23-85E24.2-001 transcribed_processed_pseudogene Mus_musculus 0 381
ENSMUST00000162574 AC122223.2-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000119769 Gm12739-001 processed_pseudogene Mus_musculus 0 285

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