C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469811 RP11-488C13.1-001 ENSG00000241081 9606 - 14:76886377-76886750 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000469811
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000469811 0.133±0.00 0.245±0.00 0.138±0.00 0.203±0.00 0.136±0.00 0.176±0.14 0.031±0.00 0.259±0.00 0.212±0.00 0.194±0.13 0.087±0.04 0.189±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_00076Y CIL_00076Y_0001 CGP 14:76826372-77028699

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 401
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 401
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 401
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 401
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 0 281
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 0 272
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 0 196
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 0 195
ENSMUST00000150485 Rpl22-006 processed_transcript Mus_musculus 5e-37 158

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