C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin-A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469878 EFNA1-003 ENSG00000169242 9606 + 1:155127888-155134486 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000469878
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000469878 7.080±0.00 1.486±0.00 2.683±2.45 2.884±0.38 2.587±0.36 1.598±1.00 4.061±0.00 1.793±0.00 13.765±8.67 6.348±4.35 1.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LV CIL_0000LV_0003 CGP 1:155078872-155134857
CIL_0000LP CIL_0000LP_0002 CGP 1:155127460-155138857

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029566 Efna1-001 protein_coding Mus_musculus 0 553
ENSMUST00000118860 Efna1-003 protein_coding Mus_musculus 0 494
ENSMUST00000118587 Efna1-002 protein_coding Mus_musculus 0 375

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