C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase kinase kinase kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470088 MAP4K2-004 ENSG00000168067 9606 - 11:64789137-64797343 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverLungOvaryTestisENST00000470088
Transcript ID Adrenal Brain Kidney Liver Lung Ovary Testis
ENST00000470088 4.349±0.00 2.492±0.00 0.689±0.00 0.554±0.00 2.554±2.13 1.659±0.00 3.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JE CIL_0005JE_0002 CGP 11:64788818-64811294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152259 Map4k2-004 retained_intron Mus_musculus 0 614
ENSMUST00000142496 Map4k2-019 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000124556 Map4k2-002 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000025897 Map4k2-001 protein_coding Mus_musculus 0 614
ENSMUST00000133696 Map4k2-003 retained_intron Mus_musculus 0 614
ENSMUST00000137095 Map4k2-005 retained_intron Mus_musculus 0 318
ENSMUST00000154900 Map4k2-015 processed_transcript Mus_musculus 0 257
ENSMUST00000128170 Map4k2-022 nonsense_mediated_decay Mus_musculus 0 250
ENSMUST00000126841 Map4k2-014 retained_intron Mus_musculus 3e-25 121
ENSMUST00000140098 Map4k2-016 retained_intron Mus_musculus 3e-20 104

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