C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splicing factor proline/glutamine-rich
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470472 SFPQ-002 ENSG00000116560 9606 - 1:35176378-35190574 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000470472
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000470472 29.202±0.00 75.532±0.00 27.530±0.00 36.140±0.00 39.556±0.00 10.840±0.00 50.999±0.00 9.468±0.00 30.818±0.00 31.590±0.00 81.853±19.13 48.844±26.75 90.509±7.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146285 Sfpq-006 processed_transcript Mus_musculus 0 1061
ENSMUST00000030623 Sfpq-001 protein_coding Mus_musculus 0 970
ENSMUST00000140682 Sfpq-002 processed_transcript Mus_musculus 0 767
ENSMUST00000143168 Sfpq-003 processed_transcript Mus_musculus 0 715
ENSMUST00000125453 Sfpq-004 processed_transcript Mus_musculus 0 446
ENSMUST00000144630 Sfpq-005 processed_transcript Mus_musculus 0 329

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