C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: baculoviral IAP repeat containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471232 BIRC6-002 ENSG00000115760 9606 + 2:32524758-32618876 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000471232
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000471232 4.002±0.00 6.542±0.00 2.767±0.00 3.054±0.00 2.574±0.00 6.981±0.00 3.951±0.00 4.683±0.00 5.359±0.40 2.348±0.25 4.502±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JH CIL_0003JH_0002 CGP 2:32277910-32618899
CIL_0003TD CIL_0003TD_0002 CGP 2:32357028-32821051

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183249 Birc6-014 nonsense_mediated_decay Mus_musculus 0 5079
ENSMUST00000180037 Birc6-001 protein_coding Mus_musculus 0 2883
ENSMUST00000183224 Birc6-007 protein_coding Mus_musculus 0 1914
ENSMUST00000182133 Birc6-005 protein_coding Mus_musculus 0 1914
ENSMUST00000182597 Birc6-004 protein_coding Mus_musculus 0 1914
ENSMUST00000182944 Birc6-003 protein_coding Mus_musculus 0 1914
ENSMUST00000182157 Birc6-017 retained_intron Mus_musculus 0 1432
ENSMUST00000117208 Gm14886-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000182147 Birc6-025 retained_intron Mus_musculus 0 911
ENSMUST00000182817 Birc6-024 nonsense_mediated_decay Mus_musculus 0 664
ENSMUST00000182804 Birc6-016 retained_intron Mus_musculus 0 372

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