C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha tubulin acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471782 ATAT1-007 ENSG00000137343 9606 + 6:30626920-30646823 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyOvaryENST00000471782
Transcript ID Adipose Bladder Breast Heart Kidney Ovary
ENST00000471782 0.241±0.00 0.158±0.00 1.011±0.00 0.250±0.00 1.017±0.68 1.399±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141662 Atat1-004 protein_coding Mus_musculus 0 832
ENSMUST00000149277 Atat1-003 protein_coding Mus_musculus 0 832
ENSMUST00000061052 Atat1-001 protein_coding Mus_musculus 0 832
ENSMUST00000056034 Atat1-005 protein_coding Mus_musculus 0 667
ENSMUST00000077494 Atat1-002 protein_coding Mus_musculus 0 667
ENSMUST00000141132 Atat1-009 protein_coding Mus_musculus 0 652
ENSMUST00000140990 Atat1-006 retained_intron Mus_musculus 0 627
ENSMUST00000127959 Atat1-007 processed_transcript Mus_musculus 0 601
ENSMUST00000137069 Atat1-010 processed_transcript Mus_musculus 0 556
ENSMUST00000137182 Atat1-008 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000130309 Atat1-012 retained_intron Mus_musculus 0 414
ENSMUST00000126744 Atat1-013 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000151009 Atat1-011 retained_intron Mus_musculus 0 281
ENSMUST00000174436 Atat1-016 retained_intron Mus_musculus 0 231

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