C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: twinfilin actin-binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472755 TWF2-002 ENSG00000247596 9606 - 3:52230898-52232228 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000472755
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000472755 0.726±0.00 1.456±0.00 3.046±0.00 5.577±0.00 7.769±3.45 6.755±0.00 11.432±0.00 24.033±0.00 12.300±9.44 20.010±0.00 6.583±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188650 Twf2-003 protein_coding Mus_musculus 0 553
ENSMUST00000024047 Twf2-001 protein_coding Mus_musculus 0 553
ENSMUST00000187647 Twf2-004 nonsense_mediated_decay Mus_musculus 0 409

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