C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and WD repeat domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473691 BRWD3-003 ENSG00000165288 9606 - X:80677245-80722573 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungPlacentaENST00000473691
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Placenta
ENST00000473691 0.732±0.00 1.365±0.00 1.360±0.00 1.849±0.00 2.797±0.00 1.074±0.00 3.171±0.00 1.278±0.00 0.467±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KC CIL_0003KC_0001 CGP X:80670854-81201942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144521 Brwd3-003 nonsense_mediated_decay Mus_musculus 0 2926
ENSMUST00000041866 Brwd3-002 nonsense_mediated_decay Mus_musculus 0 2926
ENSMUST00000150434 Brwd3-001 protein_coding Mus_musculus 0 2926
ENSMUST00000186089 Phip-012 nonsense_mediated_decay Mus_musculus 0.00000000001 77
ENSMUST00000188868 Phip-010 retained_intron Mus_musculus 0.00000000001 77
ENSMUST00000034787 Phip-003 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000190936 Phip-001 retained_intron Mus_musculus 0.0000000005 71

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