C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubinuclein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473989 UBN2-001 ENSG00000157741 9606 + 7:139231485-139308236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000473989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000473989 1.127±0.00 0.556±0.00 1.626±0.00 1.154±0.00 0.865±0.04 0.676±0.03 0.975±0.29 0.966±0.00 1.147±0.71 1.026±0.15 1.898±1.06 1.646±0.61 0.547±0.17 4.289±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QC CIL_0002QC_0001 CGP 7:139133744-139308236
CIL_0002QB CIL_0002QB_0001 CGP 7:139230356-139346319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IDA extracellular space
GO:0005634 IEA:IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162593 Ubn2-003 protein_coding Mus_musculus 0 4104
ENSMUST00000159925 Ubn2-006 retained_intron Mus_musculus 0 2750
ENSMUST00000039127 Ubn2-002 protein_coding Mus_musculus 0 2750
ENSMUST00000160583 Ubn2-001 protein_coding Mus_musculus 0 2750
ENSMUST00000118325 Gm6418-001 processed_pseudogene Mus_musculus 0 1834
ENSMUST00000161280 Ubn2-005 retained_intron Mus_musculus 0 1271
ENSMUST00000159447 Ubn2-004 protein_coding Mus_musculus 0 1256
ENSMUST00000162423 Ubn2-008 retained_intron Mus_musculus 0 318
ENSMUST00000159215 Ubn2-009 processed_transcript Mus_musculus 2e-25 124

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