C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475863 PCGF1-002 ENSG00000115289 9606 - 2:74505043-74507416 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyOvaryPlacentaENST00000475863
Transcript ID Adipose Brain Breast Colon Kidney Ovary Placenta
ENST00000475863 2.744±0.00 2.417±0.00 5.915±0.00 5.832±0.00 1.336±0.91 1.820±0.00 1.150±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177177 Pcgf1-002 protein_coding Mus_musculus 0 1020
ENSMUST00000165164 Pcgf1-001 protein_coding Mus_musculus 0 1018
ENSMUST00000092614 Pcgf1-201 protein_coding Mus_musculus 0 1003
ENSMUST00000176027 Pcgf1-005 nonsense_mediated_decay Mus_musculus 0 798
ENSMUST00000176089 Pcgf1-006 protein_coding Mus_musculus 0 364
ENSMUST00000176372 Pcgf1-004 retained_intron Mus_musculus 3e-38 163
ENSMUST00000176100 Pcgf1-003 protein_coding Mus_musculus 6e-35 152

Loading