C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092614 Pcgf1-201 ENSMUSG00000069678 10090 + 6:83078390-83080847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverMuscleOvaryPlacentaENSMUST00000092614
Transcript ID Adrenal Breast Liver Muscle Ovary Placenta
ENSMUST00000092614 5.384±0.00 3.735±0.30 1.032±0.33 2.671±0.70 7.927±4.65 3.672±1.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008022 IEA protein C-terminus binding
GO:0008270 IEA zinc ion binding
GO:0031519 ISS PcG protein complex
GO:0035518 IEA histone H2A monoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233630 PCGF1-001 protein_coding Homo_sapiens 0 1158
ENST00000465993 PCGF1-005 processed_transcript Homo_sapiens 0 361
ENST00000475863 PCGF1-002 retained_intron Homo_sapiens 0 1003
ENST00000480844 PCGF1-003 processed_transcript Homo_sapiens 0 784
ENST00000489914 PCGF1-007 retained_intron Homo_sapiens 9e-35 150
ENST00000496911 PCGF1-004 retained_intron Homo_sapiens 0 368
ENST00000552852 RP11-453D16.1-001 processed_pseudogene Homo_sapiens 0 427
ENST00000612049 PCGF1-201 protein_coding Homo_sapiens 0 985

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