C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF3 interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476050 TRAF3IP3-003 ENSG00000009790 9606 + 1:209768595-209779653 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungPlacentaENST00000476050
Transcript ID Bladder Brain Breast Colon Heart Lung Placenta
ENST00000476050 0.079±0.00 0.170±0.00 0.381±0.00 0.876±0.00 0.062±0.00 0.481±0.00 0.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089N CIL_00089N_0001 VISTA 1:209189712-209790617
CIL_0007ZL CIL_0007ZL_0001 VISTA 1:209515705-210116479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162480 Traf3ip3-011 retained_intron Mus_musculus 0 274
ENSMUST00000160332 Traf3ip3-004 retained_intron Mus_musculus 0 270
ENSMUST00000043550 Traf3ip3-001 protein_coding Mus_musculus 0 270
ENSMUST00000159666 Traf3ip3-012 processed_transcript Mus_musculus 5.60519e-45 187
ENSMUST00000160302 Traf3ip3-006 processed_transcript Mus_musculus 4.00001e-41 174

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