C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161048-ENSG00000105819 CGP 9606 7:103099776-103329511
GeneTranscriptPositionBiotype
ENSG00000105819 (PMPCB)
peptidase (mitochondrial processing) beta 		ENST00000249269 (PMPCB-001) 103297422-103313235 protein_coding
ENST00000428154 (PMPCB-007) 103297435-103312415 protein_coding
ENST00000443722 (PMPCB-006) 103297454-103312365 nonsense_mediated_decay
ENST00000444457 (PMPCB-002) 103297456-103329511 nonsense_mediated_decay
ENST00000453466 (PMPCB-004) 103297457-103312312 nonsense_mediated_decay
ENST00000456433 (PMPCB-009) 103297453-103310475 nonsense_mediated_decay
ENST00000469560 (PMPCB-008) 103310578-103312351 retained_intron
ENST00000498530 (PMPCB-005) 103297456-103309259 retained_intron
ENSG00000161048 (NAPEPLD)
N-acyl phosphatidylethanolamine phospholipase D 		ENST00000341533 (NAPEPLD-001) 103099776-103149232 protein_coding
ENST00000414118 (NAPEPLD-007) 103099776-103115340 retained_intron
ENST00000417955 (NAPEPLD-002) 103099778-103149182 protein_coding
ENST00000418294 (NAPEPLD-008) 103120146-103149099 protein_coding
ENST00000420631 (NAPEPLD-010) 103102524-103119766 nonsense_mediated_decay
ENST00000422589 (NAPEPLD-006) 103099899-103148888 nonsense_mediated_decay
ENST00000425379 (NAPEPLD-009) 103128760-103149235 protein_coding
ENST00000427257 (NAPEPLD-003) 103103087-103149560 protein_coding
ENST00000465647 (NAPEPLD-004) 103102510-103149073 protein_coding
ENST00000479761 (NAPEPLD-005) 103126790-103148976 retained_intron
ENSG00000170629 (DPY19L2P2)
DPY19L2 pseudogene 2 		ENST00000312132 (DPY19L2P2-002) 103175273-103280410 processed_transcript
ENST00000411491 (DPY19L2P2-001) 103175273-103280305 processed_transcript
ENST00000435536 (DPY19L2P2-006) 103175343-103277638 transcribed_unprocessed_pseudogene
ENST00000438364 (DPY19L2P2-003) 103175133-103280278 processed_transcript
ENST00000439473 (DPY19L2P2-005) 103175133-103280219 processed_transcript
ENST00000446373 (DPY19L2P2-004) 103273092-103280277 retained_intron
ENSG00000224415 (RPL19P12)
ribosomal protein L19 pseudogene 12 		ENST00000432746 (RPL19P12-001) 103141349-103141939 processed_pseudogene
ENSG00000236848 (RP11-401L13.5)
 ENST00000426806 (RP11-401L13.5-001) 103152007-103152325 processed_pseudogene
ENSG00000237632 (S100A11P1)
S100 calcium binding protein A11 pseudogene 1 		ENST00000477525 (S100A11P1-001) 103262000-103262311 processed_pseudogene
ENSG00000279482 (RP11-401L13.7)
 ENST00000624681 (RP11-401L13.7-001) 103161947-103162660 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0005CJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044968-ENSMUSG00000029017 CGP 10090 5:21662901-21757152
GeneTranscriptPositionBiotype
ENSMUSG00000029017 (Pmpcb)
peptidase (mitochondrial processing) beta 		ENSMUST00000030882 (Pmpcb-001) 21737141-21757152 protein_coding
ENSMUST00000125693 (Pmpcb-002) 21737141-21757152 retained_intron
ENSMUST00000137334 (Pmpcb-007) 21756781-21757146 retained_intron
ENSMUST00000141022 (Pmpcb-008) 21756645-21757152 nonsense_mediated_decay
ENSMUST00000147236 (Pmpcb-004) 21738881-21741069 retained_intron
ENSMUST00000149648 (Pmpcb-003) 21738036-21742765 protein_coding
ENSMUST00000150861 (Pmpcb-006) 21742740-21743539 retained_intron
ENSMUST00000152440 (Pmpcb-005) 21756519-21757146 retained_intron
ENSMUSG00000044968 (Napepld)
N-acyl phosphatidylethanolamine phospholipase D 		ENSMUST00000060899 (Napepld-002) 21662903-21701396 protein_coding
ENSMUST00000115217 (Napepld-001) 21662901-21701394 protein_coding
ENSMUSG00000081242 (Gm15719)
predicted gene 15719 		ENSMUST00000120619 (Gm15719-001) 21689541-21690175 processed_pseudogene
ENSMUSG00000083006 (Gm15715)
predicted gene 15715 		ENSMUST00000118032 (Gm15715-001) 21748231-21748513 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CJ_0001ENSG00000105819ENST00000249269ENST00000428154ENST00000443722ENST00000444457ENST00000453466ENST00000456433ENST00000469560ENST00000498530ENSG00000161048ENST00000341533ENST00000414118ENST00000417955ENST00000418294ENST00000420631ENST00000422589ENST00000425379ENST00000427257ENST00000465647ENST00000479761ENSG00000170629ENST00000312132ENST00000411491ENST00000435536ENST00000438364ENST00000439473ENST00000446373ENSG00000224415ENST00000432746ENSG00000236848ENST00000426806ENSG00000237632ENST00000477525ENSG00000279482ENST00000624681CIL_0005CJ_0002ENSMUSG00000029017ENSMUST00000030882ENSMUST00000125693ENSMUST00000137334ENSMUST00000141022ENSMUST00000147236ENSMUST00000149648ENSMUST00000150861ENSMUST00000152440ENSMUSG00000044968ENSMUST00000060899ENSMUST00000115217ENSMUSG00000081242ENSMUST00000120619ENSMUSG00000083006ENSMUST00000118032
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CJ_0001ENSG00000105819ENST00000249269ENST00000428154ENST00000453466ENST00000456433ENST00000498530ENSG00000161048ENST00000341533ENST00000414118ENST00000417955ENST00000420631ENST00000422589ENST00000427257ENST00000479761ENSG00000170629ENST00000312132ENST00000411491ENST00000435536ENST00000439473ENST00000446373ENSG00000224415ENST00000432746ENSG00000236848ENST00000426806ENSG00000237632ENST00000477525ENSG00000279482ENST00000624681CIL_0005CJ_0002ENSMUSG00000029017ENSMUST00000030882ENSMUST00000125693ENSMUST00000152440ENSMUSG00000044968ENSMUST00000060899ENSMUST00000115217ENSMUSG00000081242ENSMUST00000120619ENSMUSG00000083006ENSMUST00000118032
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105819 ENST00000249269 N/A N/A N/A 5.622±0.00 2.391±0.00 3.224±0.00 2.199±0.00 4.163±0.00 N/A N/A 1.124±0.00 3.830±0.00 N/A N/A
ENST00000428154 6.192±0.00 10.690±0.00 3.254±0.00 6.861±3.11 6.535±2.38 8.070±0.00 5.705±1.42 11.080±5.80 8.008±0.54 4.605±0.52 3.101±0.01 19.376±15.13 10.336±6.70 22.815±6.91
ENST00000443722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453466 15.470±0.00 21.444±0.00 N/A 19.816±0.00 19.248±0.00 16.496±0.00 15.907±0.00 21.023±0.00 15.073±0.00 9.092±0.00 4.029±1.74 18.984±0.56 11.244±2.33 29.570±3.21
ENST00000456433 N/A N/A 3.659±0.00 N/A N/A N/A N/A 6.858±0.00 N/A 5.481±0.00 N/A 10.099±0.00 N/A N/A
ENST00000469560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498530 N/A N/A N/A 6.667±0.00 N/A 7.491±0.00 2.901±0.00 4.407±0.00 N/A 3.189±0.00 N/A N/A 30.662±0.00 40.003±0.00
ENSG00000161048 ENST00000341533 0.751±0.00 0.531±0.00 N/A 3.614±0.04 0.923±0.16 N/A N/A 0.673±0.00 N/A 0.662±0.14 N/A 2.075±0.43 0.542±0.20 2.205±0.73
ENST00000414118 0.836±0.00 0.637±0.00 N/A N/A 0.965±0.00 1.411±0.00 0.595±0.00 2.026±0.00 N/A 0.901±0.61 N/A 1.393±0.77 0.212±0.10 N/A
ENST00000417955 N/A 0.319±0.00 N/A 4.135±0.00 N/A 0.846±0.00 0.581±0.00 3.225±0.00 0.552±0.00 0.470±0.00 0.299±0.00 0.773±0.14 0.424±0.00 2.586±0.00
ENST00000418294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.361±0.00
ENST00000422589 N/A N/A 2.439±0.00 3.655±0.00 N/A 3.698±2.60 0.429±0.00 1.905±0.94 N/A 0.754±0.39 N/A 3.912±2.21 0.703±0.64 5.861±3.64
ENST00000425379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427257 N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A N/A N/A
ENST00000465647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479761 N/A N/A 3.459±0.00 N/A 1.299±0.00 5.689±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170629 ENST00000312132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.522±0.00
ENST00000411491 N/A 0.109±0.00 N/A N/A N/A N/A N/A 0.205±0.00 N/A 0.131±0.00 N/A N/A 0.023±0.00 N/A
ENST00000435536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.578±0.00
ENST00000438364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A 3.819±1.43
ENST00000446373 N/A 0.542±0.00 1.411±0.00 4.681±1.62 1.361±0.00 0.366±0.00 1.200±0.39 0.633±0.08 0.147±0.00 0.243±0.00 0.291±0.15 0.789±0.39 0.149±0.07 1.307±0.00
ENSG00000224415 ENST00000432746 0.443±0.00 0.228±0.00 N/A 0.249±0.06 0.418±0.11 0.423±0.20 0.059±0.00 0.373±0.00 0.089±0.00 0.825±0.42 0.513±0.00 1.024±0.74 0.729±0.00 0.633±0.25
ENSG00000236848 ENST00000426806 0.115±0.00 0.999±0.00 N/A N/A N/A 0.175±0.00 N/A N/A 0.054±0.00 0.179±0.00 0.052±0.00 N/A N/A 0.385±0.21
ENSG00000237632 ENST00000477525 N/A 0.054±0.00 N/A N/A 0.055±0.00 N/A N/A N/A N/A 0.253±0.00 N/A 0.114±0.00 N/A 0.082±0.03
ENSG00000279482 ENST00000624681 N/A 0.128±0.00 0.304±0.00 0.428±0.34 0.362±0.35 N/A N/A 0.073±0.00 0.270±0.00 N/A N/A 0.796±0.55 0.220±0.00 0.439±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029017 ENSMUST00000030882 36.030±8.16 49.908±3.08 27.048±2.74 31.167±2.79 34.185±14.37 19.991±1.97 59.733±3.01 74.608±5.53 43.470±7.92 15.415±0.81 34.043±1.91 35.018±16.36 44.784±12.06 55.149±11.06
ENSMUST00000125693 1.717±0.16 N/A 1.253±0.05 1.291±0.00 N/A N/A N/A N/A N/A 0.979±0.01 N/A 2.010±0.37 N/A N/A
ENSMUST00000137334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.519±0.00 N/A
ENSMUSG00000044968 ENSMUST00000060899 5.091±0.68 17.647±2.94 0.590±0.06 1.508±0.64 2.736±0.72 2.132±0.47 0.842±0.25 1.909±0.37 0.607±0.43 1.694±0.55 1.966±0.90 5.381±1.23 0.730±0.22 2.153±0.84
ENSMUST00000115217 1.970±0.38 5.625±1.14 0.284±0.05 0.678±0.27 0.949±0.55 1.245±0.49 0.483±0.20 1.075±0.17 0.237±0.12 0.969±0.23 0.871±0.53 3.136±1.21 0.356±0.22 2.543±0.42
ENSMUSG00000081242 ENSMUST00000120619 0.089±0.01 N/A 0.029±0.00 0.101±0.04 N/A N/A 0.070±0.00 0.330±0.11 0.061±0.03 N/A N/A 0.411±0.33 0.040±0.02 0.127±0.04
ENSMUSG00000083006 ENSMUST00000118032 0.350±0.00 0.531±0.02 0.331±0.00 0.134±0.00 0.597±0.00 0.692±0.00 0.416±0.15 1.511±0.00 0.323±0.18 0.504±0.01 0.461±0.00 1.104±0.27 0.308±0.06 N/A

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