C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ER membrane protein complex subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477853 EMC1-003 ENSG00000127463 9606 - 1:19215664-19251552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477853
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477853 5.264±0.00 3.509±1.25 3.022±0.00 1.733±0.59 2.295±0.00 3.767±0.00 1.410±0.42 1.591±0.18 0.946±0.00 2.205±1.14 2.840±0.30 2.249±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IDA integral component of membrane
GO:0072546 IDA ER membrane protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042096 Emc1-001 protein_coding Mus_musculus 0 3579
ENSMUST00000082262 Emc1-201 protein_coding Mus_musculus 0 3542
ENSMUST00000179784 Emc1-202 protein_coding Mus_musculus 0 3542
ENSMUST00000155700 Emc1-002 processed_transcript Mus_musculus 0 1995
ENSMUST00000144335 Emc1-003 processed_transcript Mus_musculus 0 267
ENSMUST00000147999 Ubr4-004 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00003 57
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00003 57

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