C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase short-chain family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477932 ACSS2-005 ENSG00000131069 9606 + 20:34876590-34927962 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaENST00000477932
Transcript ID Kidney Liver Ovary Placenta
ENST00000477932 7.754±0.00 5.351±0.00 6.514±0.00 3.558±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BC CIL_0005BC_0001 CGP 20:34844720-34927962
CIL_0005BF CIL_0005BF_0001 CGP 20:34872146-34955817

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133654 Acss2-004 nonsense_mediated_decay Mus_musculus 0 2204
ENSMUST00000029135 Acss2-001 protein_coding Mus_musculus 0 1759
ENSMUST00000103142 Acss2-003 protein_coding Mus_musculus 0 1753
ENSMUST00000065973 Acss2-008 protein_coding Mus_musculus 0 1583
ENSMUST00000149788 Acss2-006 retained_intron Mus_musculus 0 496
ENSMUST00000131054 Acss2-005 retained_intron Mus_musculus 0 473
ENSMUST00000151781 Acss2-002 protein_coding Mus_musculus 0 425

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