C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nuclear cap binding protein subunit 1, 80kDa | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000478100  |
NCBP1-003 |
ENSG00000136937 |
9606 | + |
9:97633668-97650562  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009AQ | CIL_0009AQ_0001 | VISTA | 9:97562581-98164397 |
| CIL_000853 | CIL_000853_0001 | VISTA | 9:97573936-98178227 |
| CIL_0009AR | CIL_0009AR_0001 | VISTA | 9:97573936-98175680 |
| CIL_0002JD | CIL_0002JD_0001 | CGP | 9:97600080-97673748 |
| CIL_00029T | CIL_00029T_0001 | CGP | 9:97633626-97697357 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000339 | IEA | RNA cap binding |
| GO:0005488 | IEA | binding |
| GO:0005846 | IEA | nuclear cap binding complex |
| GO:0045292 | IEA | mRNA cis splicing, via spliceosome |
| GO:0051028 | IEA | mRNA transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030014
|
Ncbp1-001 | protein_coding | Mus_musculus | 0 | 405 |
