C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00029T_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000136937-ENSG00000136936 | CGP | 9606 | 9:97633626-97697357  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000136936  (XPA)xeroderma pigmentosum, complementation group A |
ENST00000375128 (XPA-001)
|
97674909-97697357 | protein_coding | |
|
ENST00000462523 (XPA-003)
|
97674909-97697293 | nonsense_mediated_decay | ||
|
ENST00000485042 (XPA-004)
|
97675067-97675955 | processed_transcript | ||
|
ENST00000496104 (XPA-002)
|
97684961-97697295 | processed_transcript | ||
|
ENSG00000136937 (NCBP1) nuclear cap binding protein subunit 1, 80kDa |
ENST00000375130 (NCBP1-004)
|
97666763-97670076 | protein_coding | |
|
ENST00000375147 (NCBP1-001)
|
97633626-97673748 | protein_coding | ||
|
ENST00000478100 (NCBP1-003)
|
97633668-97650562 | nonsense_mediated_decay | ||
|
ENST00000491445 (NCBP1-002)
|
97672711-97673740 | processed_transcript | ||
|
ENSG00000231521 (RP11-244N9.4) |
ENST00000437864 (RP11-244N9.4-001)
|
97634515-97636051 | antisense | |
| CIL_00029T_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000028330-ENSMUSG00000028329 | CGP | 10090 | 4:46138613-46196311 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000028329 (Xpa) xeroderma pigmentosum, complementation group A |
ENSMUST00000030013 (Xpa-001)
|
46175222-46196311 | protein_coding | |
|
ENSMUST00000058232 (Xpa-002)
|
46155347-46196311 | protein_coding | ||
|
ENSMUST00000130051 (Xpa-006)
|
46184412-46186594 | processed_transcript | ||
|
ENSMUST00000132358 (Xpa-005)
|
46175222-46185649 | nonsense_mediated_decay | ||
|
ENSMUST00000141318 (Xpa-004)
|
46175222-46185682 | processed_transcript | ||
|
ENSMUST00000142380 (Xpa-003)
|
46182969-46196304 | protein_coding | ||
|
ENSMUSG00000028330 (Ncbp1) nuclear cap binding protein subunit 1 |
ENSMUST00000030014 (Ncbp1-001)
|
46138613-46172403 | protein_coding | |
|
ENSMUST00000131187 (Ncbp1-003)
|
46157901-46160099 | processed_transcript | ||
|
ENSMUST00000133286 (Ncbp1-002)
|
46165196-46171979 | processed_transcript | ||
|
ENSMUSG00000035495 (Tstd2) thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 |
ENSMUST00000107770 (Tstd2-001)
|
46115732-46138438 | protein_coding | |
|
ENSMUST00000107772 (Tstd2-002)
|
46114746-46138475 | protein_coding | ||
|
ENSMUST00000129929 (Tstd2-006)
|
46132146-46135778 | protein_coding | ||
|
ENSMUST00000137399 (Tstd2-007)
|
46128966-46131923 | retained_intron | ||
|
ENSMUST00000144495 (Tstd2-005)
|
46131997-46138409 | protein_coding | ||
|
ENSMUST00000147837 (Tstd2-003)
|
46131934-46138694 | protein_coding | ||
|
ENSMUST00000156021 (Tstd2-004)
|
46135502-46138455 | protein_coding | ||
|
ENSMUST00000160008 (Tstd2-008)
|
46123405-46138413 | retained_intron | ||
Expression Patterns
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