C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ca++-dependent secretion activator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478570 CADPS-003 ENSG00000163618 9606 - 3:62474173-62500606 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartLiverLungMusclePlacentaENST00000478570
Transcript ID Adipose Adrenal Breast Heart Liver Lung Muscle Placenta
ENST00000478570 0.021±0.00 0.232±0.00 0.065±0.00 0.861±0.00 0.017±0.00 0.119±0.04 0.009±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000829 CIL_000829_0001 VISTA 3:62065051-62666043
CIL_000828 CIL_000828_0001 VISTA 3:62074191-62674894
CIL_0008DC CIL_0008DC_0001 VISTA 3:62120142-62722424
CIL_0007N0 CIL_0007N0_0001 UCNEbase 3:62293307-62421615
CIL_00034I CIL_00034I_0001 CGP 3:62369681-62875389

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067491 Cadps-201 protein_coding Mus_musculus 0 601
ENSMUST00000112658 Cadps-203 protein_coding Mus_musculus 0 514
ENSMUST00000112657 Cadps-202 protein_coding Mus_musculus 0 514
ENSMUST00000177814 Cadps-204 protein_coding Mus_musculus 0 510
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0.000000005 68
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 58

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