C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Ras association (RalGDS/AF-6) domain family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478619 RASSF1-011 ENSG00000068028 9606 - 3:50336377-50340980 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverLungOvaryENST00000478619
Transcript ID Breast Liver Lung Ovary
ENST00000478619 2.096±0.00 0.516±0.00 0.902±0.00 1.283±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125080 Rassf1-009 retained_intron Mus_musculus 0 387
ENSMUST00000093786 Rassf1-001 protein_coding Mus_musculus 0 385
ENSMUST00000122225 Rassf1-002 protein_coding Mus_musculus 0 329
ENSMUST00000010211 Rassf1-004 protein_coding Mus_musculus 0 281
ENSMUST00000156198 Rassf1-003 nonsense_mediated_decay Mus_musculus 0 254

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