C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP3 actin-related protein 3 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478928 ACTR3-002 ENSG00000115091 9606 + 2:113950824-113958589 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartLiverLungMuscleOvaryENST00000478928
Transcript ID Adrenal Bladder Breast Colon Heart Liver Lung Muscle Ovary
ENST00000478928 2.743±0.00 1.045±0.00 2.526±1.01 3.531±0.00 0.813±0.00 2.671±0.00 3.353±0.00 0.229±0.00 5.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WV CIL_0002WV_0002 CGP 2:113889960-115845752

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027579 Actr3-201 protein_coding Mus_musculus 0 1249
ENSMUST00000178474 Actr3-001 protein_coding Mus_musculus 0 1249
ENSMUST00000118948 Gm8822-001 processed_pseudogene Mus_musculus 0 1227
ENSMUST00000186008 Actr3-006 retained_intron Mus_musculus 0 671
ENSMUST00000191578 Actr3-011 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000188362 Actr3-010 retained_intron Mus_musculus 0 361

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