C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479021 PPIA-009 ENSG00000196262 9606 + 7:44796681-44824564 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SC CIL_0000SC_0001 CGP 7:44748581-44824564
CIL_0000SB CIL_0000SB_0001 CGP 7:44796680-44848083

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 2e-18 97
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 2e-18 97
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 2e-18 97
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 2e-18 97
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 2e-18 97
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 2e-18 97
ENSMUST00000185012 Gm12728-003 protein_coding Mus_musculus 2e-18 97
ENSMUST00000184254 Gm12728-002 protein_coding Mus_musculus 2e-18 97
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 3e-16 90
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 3e-16 90
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 3e-16 90
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0.00000000000001 84
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0.00000000000001 84

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