C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479267 RP11-274B21.1-001 ENSG00000242588 9606 + 7:128533652-128615970 transcribed_unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryPlacentaTestisENST00000479267
Transcript ID Brain Lung Ovary Placenta Testis
ENST00000479267 1.598±0.00 6.909±0.00 2.582±0.00 0.511±0.00 0.349±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092537 Tlk2-002 protein_coding Mus_musculus 0 1153
ENSMUST00000106941 Tlk2-006 protein_coding Mus_musculus 0 1153
ENSMUST00000152404 Tlk2-005 protein_coding Mus_musculus 0 797
ENSMUST00000120609 Gm13161-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000120042 Gm13240-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000117481 Gm13243-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000121771 Gm13168-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000126175 Tlk2-003 nonsense_mediated_decay Mus_musculus 0 627
ENSMUST00000015107 Tlk2-008 protein_coding Mus_musculus 0 627
ENSMUST00000106939 Tlk2-001 protein_coding Mus_musculus 0 627
ENSMUST00000149459 Tlk2-011 protein_coding Mus_musculus 0 381
ENSMUST00000145048 Tlk2-009 protein_coding Mus_musculus 0 355
ENSMUST00000126054 Tlk2-010 retained_intron Mus_musculus 0 355
ENSMUST00000123050 Tlk2-004 retained_intron Mus_musculus 0 316
ENSMUST00000134419 Tlk2-012 retained_intron Mus_musculus 9.99967e-42 174

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