C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tousled-like kinase 2 (Arabidopsis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106941 Tlk2-006 ENSMUSG00000020694 10090 + 11:105181527-105282177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106941
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106941 4.148±1.45 3.778±1.17 8.776±2.41 8.986±0.79 3.973±0.84 3.277±0.91 2.621±0.30 3.692±0.59 4.264±2.32 4.684±1.10 6.734±2.09 6.023±0.88 8.415±2.50 8.811±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000563 CIL_000563_0003 CGP 11:105178807-105351139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001672 IEA regulation of chromatin assembly or disassembly
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005882 IEA intermediate filament
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007059 IEA chromosome segregation
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0032435 IEA negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0048471 IEA perinuclear region of cytoplasm
GO:0071480 IEA cellular response to gamma radiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326270 TLK2-004 protein_coding Homo_sapiens 0 2968
ENST00000343388 TLK2-002 protein_coding Homo_sapiens 0 4069
ENST00000346027 TLK2-001 protein_coding Homo_sapiens 0 4998
ENST00000414066 RP11-162G10.1-001 processed_pseudogene Homo_sapiens 0 2684
ENST00000479267 RP11-274B21.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1153
ENST00000530992 TLK2P1-001 processed_pseudogene Homo_sapiens 0 4442
ENST00000542523 TLK2-201 protein_coding Homo_sapiens 0 4071
ENST00000578697 TLK2-013 protein_coding Homo_sapiens 0 658
ENST00000578931 TLK2-017 processed_transcript Homo_sapiens 0 331
ENST00000579450 TLK2-008 protein_coding Homo_sapiens 0 300
ENST00000580203 TLK2-006 retained_intron Homo_sapiens 0 1496
ENST00000580705 TLK2-012 protein_coding Homo_sapiens 0 531
ENST00000581041 TLK2-005 protein_coding Homo_sapiens 0 2073
ENST00000581286 TLK2-014 retained_intron Homo_sapiens 0 337
ENST00000582195 TLK2-010 protein_coding Homo_sapiens 0 392
ENST00000582660 TLK2-016 retained_intron Homo_sapiens 0 287
ENST00000582809 TLK2-003 protein_coding Homo_sapiens 0 4518
ENST00000583310 TLK2-018 retained_intron Homo_sapiens 0 580
ENST00000583690 TLK2-011 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000583843 TLK2-007 protein_coding Homo_sapiens 0 278
ENST00000584367 TLK2-015 retained_intron Homo_sapiens 0 281
ENST00000605862 RP11-274B21.1-002 processed_transcript Homo_sapiens 0 883
ENST00000619310 TLK2-202 protein_coding Homo_sapiens 0 2968

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