C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tousled-like kinase 2 (Arabidopsis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015107 Tlk2-008 ENSMUSG00000020694 10090 + 11:105181917-105282176 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015107
Transcript ID Adipose Bladder Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015107 1.995±0.00 8.257±0.00 10.320±1.72 2.125±0.03 6.589±4.91 2.633±0.00 2.469±0.36 6.447±1.12 10.264±4.61 22.743±2.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000563 CIL_000563_0003 CGP 11:105178807-105351139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001672 ISS regulation of chromatin assembly or disassembly
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005524 ISS ATP binding
GO:0005634 ISS nucleus
GO:0005882 IDA intermediate filament
GO:0006468 ISS protein phosphorylation
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0007059 ISS chromosome segregation
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0016568 IEA chromatin modification
GO:0018105 ISS peptidyl-serine phosphorylation
GO:0030154 IEA cell differentiation
GO:0032435 ISS negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035556 ISS intracellular signal transduction
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326270 TLK2-004 protein_coding Homo_sapiens 0 2966
ENST00000343388 TLK2-002 protein_coding Homo_sapiens 0 4638
ENST00000346027 TLK2-001 protein_coding Homo_sapiens 0 4069
ENST00000414066 RP11-162G10.1-001 processed_pseudogene Homo_sapiens 0 2187
ENST00000479267 RP11-274B21.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 627
ENST00000530992 TLK2P1-001 processed_pseudogene Homo_sapiens 0 3910
ENST00000542523 TLK2-201 protein_coding Homo_sapiens 0 4460
ENST00000578697 TLK2-013 protein_coding Homo_sapiens 0 658
ENST00000578931 TLK2-017 processed_transcript Homo_sapiens 0 331
ENST00000579450 TLK2-008 protein_coding Homo_sapiens 0 300
ENST00000580203 TLK2-006 retained_intron Homo_sapiens 0 1495
ENST00000580705 TLK2-012 protein_coding Homo_sapiens 0 534
ENST00000581041 TLK2-005 protein_coding Homo_sapiens 0 2073
ENST00000581286 TLK2-014 retained_intron Homo_sapiens 0 337
ENST00000582195 TLK2-010 protein_coding Homo_sapiens 0 392
ENST00000582660 TLK2-016 retained_intron Homo_sapiens 0 287
ENST00000582809 TLK2-003 protein_coding Homo_sapiens 0 4069
ENST00000583310 TLK2-018 retained_intron Homo_sapiens 0 580
ENST00000583690 TLK2-011 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000583843 TLK2-007 protein_coding Homo_sapiens 0 525
ENST00000584367 TLK2-015 retained_intron Homo_sapiens 0 281
ENST00000605862 RP11-274B21.1-002 processed_transcript Homo_sapiens 0 627
ENST00000619310 TLK2-202 protein_coding Homo_sapiens 0 2966

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