C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479738 RPL7P16-001 ENSG00000242899 9606 - 3:132243528-132244265 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000479738
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000479738 0.180±0.00 0.198±0.00 0.045±0.00 0.131±0.00 0.360±0.00 0.045±0.00 0.080±0.00 0.253±0.16 0.122±0.00 0.170±0.09 0.028±0.00 0.456±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 652
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 647
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 590
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 383
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 231
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 231

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