C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: poly(A) binding protein, cytoplasmic 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479873 PABPC1L-006 ENSG00000101104 9606 + 20:44932690-44939317 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENST00000479873
Transcript ID Muscle Placenta
ENST00000479873 0.129±0.00 0.453±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UV CIL_0003UV_0001 CGP 20:44885676-44959035
CIL_0002ZU CIL_0002ZU_0001 CGP 20:44910062-44960486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067715 Pabpc1l-001 protein_coding Mus_musculus 7e-35 152

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