C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 10 open reading frame 90
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480379 C10orf90-005 ENSG00000154493 9606 - 10:126425552-126463376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverMuscleOvaryPlacentaENST00000480379
Transcript ID Breast Colon Liver Muscle Ovary Placenta
ENST00000480379 0.095±0.00 0.008±0.00 0.054±0.00 0.147±0.00 0.045±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VM CIL_0003VM_0001 CGP 10:126012381-126670446
CIL_00047A CIL_00047A_0002 CGP 10:126424997-127452517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0015629 IDA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106129 D7Ertd443e-002 protein_coding Mus_musculus 0 568
ENSMUST00000094002 D7Ertd443e-001 protein_coding Mus_musculus 0 568
ENSMUST00000172947 D7Ertd443e-003 protein_coding Mus_musculus 0 568

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