C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480903 RPL7P6-001 ENSG00000227525 9606 + 12:19089151-19089888 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000480903
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000480903 0.144±0.00 0.322±0.00 0.250±0.00 0.263±0.00 0.405±0.00 0.052±0.00 0.212±0.00 0.052±0.00 0.256±0.00 0.387±0.00 0.109±0.01 0.026±0.00 0.131±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FI CIL_0005FI_0001 CGP 12:18738101-19376400

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 841
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 802
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000118553 Gm8534-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 590
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 590
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 536
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 488
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 255
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 255

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