C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calsequestrin 1 (fast-twitch, skeletal muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481081 CASQ1-002 ENSG00000143318 9606 + 1:160192638-160199053 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000481081
Transcript ID Lung
ENST00000481081 0.160±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CV CIL_0000CV_0002 CGP 1:160190556-160215376

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003554 Casq1-001 protein_coding Mus_musculus 0 990
ENSMUST00000170700 Casq1-003 protein_coding Mus_musculus 0 283
ENSMUST00000170638 Casq1-002 retained_intron Mus_musculus 0 267

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