C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481385 PHF3-009 ENSG00000118482 9606 + 6:63635823-63698245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000481385
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000481385 4.549±0.00 3.140±0.00 8.393±0.00 6.420±0.00 2.830±0.00 4.710±0.00 6.633±0.00 9.138±0.00 1.311±0.00 12.158±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088310 Phf3-201 protein_coding Mus_musculus 0 1467
ENSMUST00000186733 Phf3-003 protein_coding Mus_musculus 0 1467
ENSMUST00000185521 Phf3-011 retained_intron Mus_musculus 0 523
ENSMUST00000191064 Phf3-006 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000191245 Phf3-001 retained_intron Mus_musculus 0 462
ENSMUST00000186105 Phf3-002 retained_intron Mus_musculus 0 462
ENSMUST00000117483 Gm13378-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000188780 Phf3-007 protein_coding Mus_musculus 0 241
ENSMUST00000188847 Phf3-004 retained_intron Mus_musculus 9.99995e-41 172
ENSMUST00000187600 Phf3-008 processed_transcript Mus_musculus 5e-40 171

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