C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PHD finger protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118482 PHF3 9606 + 6:63635820-63779336 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262043 PHF3-001 63635836-63715481 protein_coding
  ENST00000393387 PHF3-201 63646526-63714509 protein_coding
  ENST00000420043 PHF3-005 63777605-63779336 processed_transcript
  ENST00000481385 PHF3-009 63635823-63698245 protein_coding
  ENST00000494284 PHF3-003 63635836-63694690 protein_coding
  ENST00000503248 PHF3-010 63702293-63706154 processed_transcript
  ENST00000505138 PHF3-004 63706800-63779208 protein_coding
  ENST00000506783 PHF3-008 63635820-63709214 protein_coding
  ENST00000509330 PHF3-002 63636481-63686324 protein_coding
  ENST00000509876 PHF3-006 63636111-63714454 nonsense_mediated_decay
  ENST00000514822 PHF3-011 63679685-63684245 protein_coding
  ENST00000515594 PHF3-007 63635825-63712363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262043ENST00000393387ENST00000481385ENST00000509876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262043 N/A N/A N/A 1.128±0.00 N/A 1.283±0.00 1.655±0.00 N/A 3.043±0.00 4.783±0.00 0.353±0.00 2.869±0.00 N/A N/A
ENST00000393387 8.623±0.00 4.764±0.00 2.817±0.00 5.738±0.92 6.651±1.19 7.419±5.35 3.415±1.75 4.484±0.66 4.650±2.55 6.724±1.06 6.457±5.81 6.505±1.51 3.664±1.62 13.989±0.47
ENST00000481385 N/A N/A 4.549±0.00 3.140±0.00 8.393±0.00 6.420±0.00 2.830±0.00 4.710±0.00 6.633±0.00 9.138±0.00 1.311±0.00 12.158±0.00 N/A N/A
ENST00000509876 N/A N/A N/A N/A N/A 2.112±0.00 N/A N/A N/A N/A 0.447±0.00 N/A N/A 5.579±3.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007275 NAS multicellular organismal development
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034768 phf3 PHD finger protein 3 protein_coding Danio_rerio
ENSMUSG00000048874 Phf3 PHD finger protein 3 protein_coding Mus_musculus

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