C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088310 Phf3-201 ENSMUSG00000048874 10090 - 1:30802342-30863256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088310
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088310 2.216±1.46 3.328±0.63 4.656±0.45 5.638±0.83 2.961±1.82 3.069±0.57 1.268±0.31 1.346±0.13 2.864±1.98 2.449±1.58 2.311±0.18 4.641±3.57 6.214±1.85 1.720±0.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262043 PHF3-001 protein_coding Homo_sapiens 0 4327
ENST00000393387 PHF3-201 protein_coding Homo_sapiens 0 4327
ENST00000481385 PHF3-009 protein_coding Homo_sapiens 0 1467
ENST00000494284 PHF3-003 protein_coding Homo_sapiens 0 1712
ENST00000505138 PHF3-004 protein_coding Homo_sapiens 0 518
ENST00000506783 PHF3-008 protein_coding Homo_sapiens 0 2497
ENST00000509330 PHF3-002 protein_coding Homo_sapiens 0 1495
ENST00000509876 PHF3-006 nonsense_mediated_decay Homo_sapiens 0 3843
ENST00000514822 PHF3-011 protein_coding Homo_sapiens 0 374
ENST00000515594 PHF3-007 protein_coding Homo_sapiens 0 2789

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