C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481456 DDX39B-005 ENSG00000198563 9606 - 6:31532413-31542001 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungOvaryENST00000481456
Transcript ID Bladder Breast Kidney Liver Lung Ovary
ENST00000481456 1.622±0.00 2.053±0.00 2.060±0.00 2.722±0.00 1.680±0.00 2.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174164 Ddx39b-005 retained_intron Mus_musculus 0 1845
ENSMUST00000173731 Ddx39b-006 protein_coding Mus_musculus 0 1129
ENSMUST00000172549 Ddx39b-004 protein_coding Mus_musculus 0 1114
ENSMUST00000068056 Ddx39b-001 protein_coding Mus_musculus 0 1114
ENSMUST00000174757 Ddx39b-002 protein_coding Mus_musculus 0 990
ENSMUST00000162168 Zkscan5-004 nonsense_mediated_decay Mus_musculus 0.0000006 62

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